2022
JU Park, AWL Tsai, AN Rizo, VH Truong, TX Wellner, RD Schargel, ... “Structures of the holo CRISPR RNA-guided transposon integration complex” Nature: 1-3, Nov 28, 2022.
JU Park, AWL Tsai, TH Chen, JE Peters, EH Kellogg. “Mechanistic Details of CRISPR-associated Transposon Recruitment and Integration Revealed by Cryo-EM.” Proceedings of the National Academy of Sciences 119 (32), e2202590119
A Jack, Y Kim, AR Strom, DSW Lee, B Williams, JM Schaub, EH Kellogg, ... “Compartmentalization of Telomeres Through DNA-scaffolded Phase separation” Developmental cell 57 (2), 277-290. e9
2021
JU Park, Tsai A.W.T., Mehrotra, E., Petassi M.T., Hsieh S-C., Ke A., Peters J.E., Kellogg E.H. “Structural Basis of Target Site Selection in RNA-guided Transposition Systems”. Science, July 15, 2021. doi: 10.1126/science.abi8976
AR VanderWal, JU Park, B Polevoda, EH Kellogg, MR O’Connell. “CRISPR-Csx28 Forms a Cas13b-activated Membrane Pore Required for Robust CRISPR-Cas Adaptive Immunity.” 2021
2020
Cianfrocco M.A. and Kellogg E.H. “What Could Go Wrong? A Practical Guide to Single-particle Cryo-EM: From Biochemistry to Atomic Models” J. Chem. Inf. Model. 2020
2019
Ghanim G.*, Kellogg EH.*#, Nogales E., and Rio DC. # “Structure of a P Element Transposase-DNA Complex Reveals Unusual DNA Structures and GTP-DNA Contacts” Nature Struct. Mol. Biol. October 2019
* equal contribution
# co-corresponding authors
2018
Kellogg EH.*, Hejab N*, Poepsel S., Downing KH, Dimaio F., and Nogales E. “Near-atomic Model of Microtubule-tau Interactions” Science 360(6394):1242-46, May 2018
* equal contribution
2017
Nogales E., and Kellogg EH. “Challenges and Opportunities in the High-resolution CryoEM Visualization of Microtubules and their Binding Partners” Curr. Op. Struct. Biol. 46:65-70, October 2017
Howes SC., Geyer E., LaFrance BJ., Zhang R., Kellogg EH., Westermann S., Rice L., and Nogales E., “Structural Differences Between Yeast and Mammalian Microtubules Revealed by Cryo-EM” Journal of Cell Biology DOI: 10.1083/jcb.201612195, June 2017
Kellogg EH., Hejab N., Howes S., Northcote P., Miller JH., Diaz FJ., Downing KH. and Nogales E. “Insights into the Distinct Mechanisms of Action of Taxane and Non-Taxane Microtubule Stabilizers from Cryo-EM Structures” Journal of Molecular Biology 429 (5):633-646, March 2017
Kellogg EH*, Howes S.*, Ti SH., Kapoor T., Chacon P., and Nogales E. “Near-atomic Cryo-EM Structure of PRC1 Bound to the Microtubule” PNAS 113(34):9430-9, August 2016
2016
2014
Alushin GM.*, Lander GC.*, Kellogg EH*, Zhang R., Baker D., Nogales E. “High-resolution Microtubule Structures Reveal the Structural Transitions in Alphabeta-tubulin Upon GTP Hydrolysis” Cell 157(5):1117-29, May 2014
2013 & prior
Leaver-Fay A., O’Meara M., Tyka M., Jacak R., Song Y., Kellogg EH, Thompson J., Davis I., Pache R., Kortemme T., Lyskov S., Gray J., Snoeyink J., Baker D., Kuhlman B. “Scientific Benchmarks for Guiding Macromolecular Energy Function Improvement” Methods in Enzymology 523:109-43, 2013
Kellogg EH, Lange OF., Baker D., “Evaluation and Optimization of Discrete State Models of Protein Folding” Journal of Physical Chemistry B. 116(37):11405-13, 2012
Liu Y., Kellogg EH, Liang H. “Canonical and Micro-canonical Analysis of Folding of Trpzip2: An All-Atom Replica Exchange Monte Carlo Simulation Study” Journal of Chemical Physics. 137(4):045103, 2012
Kellogg EH, Leaver-Fay A., Baker D., “Role of Conformational Sampling in Computing Mutation-induced Changes in Protein Structure and Stability” Proteins: Structure, Function, Bioinformatics. 29(3):830-8, 2011
Fowler DM., Araya CL., Fleishman SJ., Kellogg EH., Stephany JJ., Baker D., Fields S. “High-Resolution Mapping of Protein Sequence-Function Relationships” Nature Methods. 7(9):741-6, 2010
Jung HS, Okegawa Y., Shih PM., Kellogg EH, Abdel-Ghany SE., Pilon M., Sjolander D., Shikanai T., Niyogi K., “Arabidopsis thaliana PGR7 Encodes a Conserved Chloroplast Protein That is Necessary for Efficient Photosynthetic Electron Transport” PloS One 5(7):e11688, 2010
Leung CC., Kellogg EH., Kuhnert A., Hanel D., Baker D., Glover JN., “Insights from the Crystal Structure of the Sixth BRCT Domain of Topoisomerase IIBeta Binding Protein 1” Proteins: Structure, Function, Bioinformatics. 19(1):162-7, 2010
Raman S., Vernon R., Thompson J., Tyka M., Sadreyev R., Pei J., Kim D., Kellogg EH., DiMaio F., Lange O., Kinch L., Sheffler W., Kim B, Das R., Grishin N., Baker D. “Structure Prediction for CASP8 with All-Atom Refinement using Rosetta” Proteins: Structure, Function, Bioinformatics. 77(S9):89-99, 2009